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alternative splicing (2-3/gene) and multiple different types of
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post-translational modification, each of which may go to
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differing degrees of completion, make the proteome
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MUCH larger than the transcriptome (10X-100X)
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protein levels and transcript expression not perfectly
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correlated
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our ability to predict genes and transcripts, let alone proteins,
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from primary genomic sequence is only fair.
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proteome informatics problems:
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a. protein identification
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b. pattern analysis--similar
to array analysis
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