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represent haplotypes as regular expressions with
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limited
gaps, e.g. (-,-,-,0,0,*,-,-)
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look for "overrepresented" haplotypes--occurring
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more than a certain # of times in the cases (note--
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not a statistical comparison, but a fixed threshold)
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observe that any sub-haplotype of an
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overrepresented haplotype (introducing more *'s)
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is also overrepresented, and recurse to find the
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maximal overrepresented haplotypes
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