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MEDED 534 , Autumn 2001
Biology for Informaticists

Syllabus

Instructor: Stuart Yarfitz
Office: HSB A228

Office Hours:
e-mail: stuy@u.washington.edu

Phone: 206-616-4626

Class Meeting Times and Location:
Mon 9:30 - 10:50 HSB I-132
Wed 9:30 - 10:50 Health Sciences Library Microlab

Course Description

A computing and information oriented treatment of the core concepts of human biology, addressing structure (anatomy) and function (physiology) at three levels of organization: organism (macroscopic), cell (microscopic) and gene (molecular). The course will be organized into six modules, each of which will include a conceptual overview and in-depth illustration using examples from the normal adult human brain. Course content will be presented from a computational perspective with the extensive use of electronic resources.

Goals of the course: 

  1. To present modern biological concepts in a way that illuminates those aspects of biomedical research and health applications that involve computers and information science 
  2. To provide a way to understand how biologists view the world, and how they investigate and generate new knowledge
  3. To become conversant with biomedical researchers and practitioners regarding the generation and utilization of biological information 

Specific objectives:

  • Students will learn the core concepts and basic vocabulary used to describe biological entities and processes at different levels of organization (macroscopic, microscopic, and molecular).
  • Students will become familiar with the various laboratory technologies, measurable attributes, and types of information associated with biological phenomena.
  • Students will become familiar with systems for organizing, analyzing, accessing, displaying, representing, and integrating biological information.
  • Students will be able to recognize the types of questions and problems addressed by biomedical researchers, and the appropriate informatics tools.
  • Students will be able to identify the functions of and critically evaluate different biological information resources.

Course format:
One 1.5 hr lecture/discussion, one 1.5 hr lecture/discussion/computer lab each week; approximately four weeks at each level of organization or two weeks for each module. Students will be assigned tutorials and exercises to be performed outside of classroom hours.

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Grading Policy

Grades will be based on three take-home exams

 

 

 

 

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 Last Updated:
09/16/2001

Contact the instructor at: stuy@u.washington.edu