Rose Lab University of Washington

CODEHOP: COnsensus-DEgenerate Hybrid Oligonucleotide Primers

GENES IDENTIFIED USING CODEHOPS

Organism

• Bacteria
• Hyphomicrobium chloromethanicum
• Proteobacteria
• Staphylococcus aureus
• Eukaryotes
• Ascidian (Halocynthia roretzi)
• Chicken
• Grasshopper (Schistocerca gregaria)
• Humans
• Kinetoplastida (Leishmania major)
• Microsporidia (Varimorpha, Nosema, Endoreticulata, Spraguea lophii)
• Mouse
• Poppy (Papaver rhoeas)
• Parabasalia (Trichomonas vaginalis)
• Xenopus
• Zebrafish
• Virus
• Herpesviridae
• Retroviridae

Gene Family

• Bicoid-homeodomain transcription factors
• DNA Polymerase
• Ferric-uptake regulator (Fur)
• Hairy-related proteins (bHLH domain transcription factors)
• Integrin
• methyltransferase
• Proteasome (Alpha)
• Self-incompatibility S-gene
• Serine Protease
• T-box gene (transcription factor)
• tRNA Synthetase
• Xenobiotic-activated orphan nuclear receptors

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Page last modified 4/15/09

trose@u.washington.edu