PABIO/ MEBI/ PHG 536 Spring Quarter 2008
http://courses.washington.edu/bioinfo/
Course Organizers:
Timothy Rose (206-616-2084, trose@u.washington.edu)
Peter Myler (206-256-7332, mylerpj@u.washington.edu)
Mondays and Wednesdays
HSL Learning Commons Classroom A (Computer Lab)
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Week 1 |
March 31 |
The nature of biological sequences |
Lecture |
Rose |
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April 2 |
NCBI resources and databases |
Lecture/lab |
Myler |
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Week 2 |
Apr 7 |
DNA analysis |
Lecture/lab |
Rose |
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Apr 9 |
DNA analysis |
Lab |
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Week 3 |
April 14 |
Protein Analysis |
Lecture/lab |
Rose |
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April 16 |
Protein Analysis |
Lab |
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Week 4 |
Apr 21 |
BLAST searching |
Lecture/lab |
Myler |
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Apr 23 |
Nucleotide BLAST |
Lab |
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Week 5 |
Apr 28 |
Protein BLAST |
Lecture/lab |
Rose |
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April 30 |
Protein Motif searching |
Lecture/lab |
Rose |
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Week 6 |
May 5 |
EST analysis |
Lecture/lab |
Rose |
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May 7 |
SNP analysis |
Lecture/lab |
Rose |
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Week 7 |
May 12 |
Multiple Sequence alignment |
Lecture/lab |
Myler |
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May 14 |
Phylogenetic analysis |
Lecture/lab |
Myler |
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Week 8 |
May 19 |
Genome sequencing and analysis |
Lecture/lab |
Myler |
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May 21 |
Genome sequencing and analysis |
Lab |
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Week 9 |
May 26 |
Memorial Day Holiday |
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May 28 |
Pathway analysis |
Lecture/lab |
Myler |
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Week 10 |
June 2 |
Protein structure modeling |
Lecture/lab |
Rose |
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June 4 |
Protein structure |
Lab |
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June 7 |
Take-home finals due |
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