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FISH 559: Numerical Computing for the Natural Resources

Class Notes
 
 

Lecture

Date

Topic



ADMB Workshop Schedule
A
17 Sept
ADMB Workshop Day 1
B
18 Sept
ADMB Workshop Day 2 (Ex1 Soln; Ex2 soln)
C
19 Sept
ADMB Workshop Day 3 (Day 3 Solution)
D
20 Sept
ADMB Workshop Day 4 (Ex4a Soln; Ex4b Soln)
E
21 Sept
ADMB Workshop Day 5 (Day 5 Solutions)


Work on selecting a project
1
3 Oct
Linear Mixed models

2

5 Oct

Nonlinear Mixed Effects Models

3

7 Oct

Numerical integration methods

4

10 Oct

Simulation and R

5

12 Oct

Initial project presentations

6

14 Oct

Non-linear minimization

7

17 Oct

No Lecture

8

19 Oct

No Lecture

9

21 Oct

No Lecture

10

24 Oct

Non-linear minimization in R

11

26 Oct

Differentiation and Integration in R

12

28 Oct

Numerical differentiation methods

13

31 Oct

Template Model Builder (TMB Examples)

14

2 Nov

Template Model Builder

15

4 Nov

Root finding methods


16

7 Nov

ADMB and TMB Example


17

9 Nov

Random number generation (solution)

18

11 Nov

No Lecture - Holiday: Veterans Day

19

14 Nov

No Lecture

20

16 Nov

No Lecture

21

18 Nov
Interpolation Methods
22
21 Nov
GAM and Project Discussion
23
23 Nov
Sorting and Searching

24

25 Nov

No Lecture - Holiday: Thanksgiving
25
28 Nov
WinBUGS-1 (Guest Lecture)

26

30 Nov

WinBUGS-2 (Guest Lecture)

27
2 Dec
No Lecture

28

5 Dec

Project presentations

29

7 Dec

Project presentations

30

9 Dec

Project presentations

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