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FISH 559: Numerical Computing for the Natural Resources

Class Notes
 
 

Lecture

Date

Topic



TMB Workshop Schedule
A
19 Sept
TMB Workshop Day 1
B
20 Sept
TMB Workshop Day 2 (Ex1 Soln; Ex2 soln)
C
21 Sept
TMB Workshop Day 3 (Day 3 Solution)
D
22 Sept
TMB Workshop Day 4 (Ex4a Soln; Ex4b Soln)
E
23 Sept
TMB Workshop Day 5 (Day 5 Solutions)


Work on selecting a project
1
26 Sept
Linear Mixed models
2
28 Sept
Numerical integration methods
3
1 Oct
No Lecture
4
3 Oct
No Lecture
5
5 Oct
No Lecture
6
8 Oct
Initial project presentations

7

10 Oct

Nonlinear Mixed Effects Models

8

12 Oct

Non-linear minimization

9

15 Oct

Non-linear minimization in R

10

17 Oct

Differentiation and Integration in R

11

19 Oct

Numerical differentiation methods

12

22 Oct

Simulation and R

13

24 Oct
AD Model Builder (ADMB Examples)

14

26 Oct

AD Model Builder

15

29 Oct

AD Model Builder

16

31 Oct

No Lecture

17

2 Nov

No Lecture

18

5 Nov

AD Model Builder

19

7 Nov

Sorting and Searching

20

9 Nov

Root finding methods


21
12 Nov
No Lecture - Veterans Day

22

14 Nov

Random number generation (solution)

23

16 Nov

Interpolation Methods

24

19 Nov

GAM     

25

21 Nov

Project Discussion

26

23 Nov
No Lecture - Thanksgiving
27
26 Nov
WinBUGS-1 (Guest Lecture)
28
28 Nov
WinBUGS-2 (Guest Lecture)

29

30 Nov

No Lecture
30
3 Dec
Project presentations
31
5 Dec
Project presentations

32

7 Dec

Project presentations

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